ncRNA ID | novel_egu_miR761 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr10:21495044-21495174 [+] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 108 - GACGGUCGAUGUCGCGAAAGAAGG - 131 |
Stem-loop(if miRNA) |
--              UA          UG   AAC --  CG UUCCAGAUCUGUGUGGACGAUGG   UUCUUUCGCGACAU  ACCGUUGGAU  CGU   G  CC  C                       A   ||||||||||||||  ||||||||||  |||   |  ||  |                       A   AAGAAAGCGCUGUA  UGGCAGCCUA  GCG   C  GA  G                       A GG              GC          GA   GAA GU  -- GAAGUUUCGUGAGGAUGGACAAG |
Stem-loop sequence | UUCUUUCGCGACAUUAACCGUUGGAUUGCGUAACGCCCGCUUCCAGAUCUGUGUGGACGAUGGAAAGAACAGGUAGGAGUGCUUUGAAGGAGUGCAAGGCGAGAUCCGACGGUCGAUGUCGCGAAAGAAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01029617.1 |
|
1.5 | TSA: Elaeis guineensis Unigene11450_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010914430.2 |
|
2.5 | PREDICTED: Elaeis guineensis probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (LOC105038581), mRNA | NA | coding protein | psRNATarget |