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BaseInfo

ncRNA ID novel_egu_miR757
Species Elaeis guineensis
Class miRNA
Genome position Chr9:26600382-26600458 [-]
Reference genome EG5
Source SRR3042547
Length 21
Mature sequence(if miRNA) 57 - UUUCAAAAUGAAGUCGGCAAG - 77
Stem-loop(if miRNA) --        UG                         A
  UUUCAAAA  AAGUCGGCAAGUGGUUUGCCGACUU A
  ||||||||  ||||||||||||||||||||||||| G
  AAAGUUUU  UUUAGCCGUUCACCAAACGGCUGAA U
AU        GU                         G
Stem-loop sequence UUUCAAAAUGAAGUCGGCAAGUGGUUUGCCGACUUAAGUGAAGUCGGCAAACCACUUGCCGAUUUUGUUUUGAAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01011317.1
ncRNA:21   GAACGGCUGAAGUAAAACUUU   1
  ****=||||||||||||||||
targets:812   AACAUCGACUUCAUUUUGAAA   832

3.0 TSA: Elaeis guineensis CL4042.Contig3_All transcribed RNA sequence NA coding protein psRNATarget
GBSV01011316.1
ncRNA:21   GAACGGCUGAAGUAAAACUUU   1
  ****=||||||||||||||||
targets:812   AACAUCGACUUCAUUUUGAAA   832

3.0 TSA: Elaeis guineensis CL4042.Contig2_All transcribed RNA sequence NA coding protein psRNATarget