ncRNA ID | novel_egu_miR743 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr7:766272-766396 [+] |
Reference genome | EG5 |
Source | SRR3042547 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGCCGGCUUCACUAUUUAAU - 21 |
Stem-loop(if miRNA) |
--                  AAUAGA     UU        AAAAUC        C U       UUGCCGGCUUCACUAUUU      UUUUU  AAAAAAUU      AGUGAAGU G CAAUC   ||||||||||||||||||      |||||  ||||||||      |||||||| | ||||A   AACGGCCGAAGUGAUAAG      AAAAA  UUUUUUAA      UUACUUCA C GUUAG UA                  AAUAAA     UU        GUCUUU        A U     |
Stem-loop sequence | UUGCCGGCUUCACUAUUUAAUAGAUUUUUUUAAAAAAUUAAAAUCAGUGAAGUCGUCAAUCAGAUUGUCAACUUCAUUUUUCUGAAUUUUUUUUAAAAAAAAUAAGAAUAGUGAAGCCGGCAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010922482.2 |
|
3.0 | PREDICTED: Elaeis guineensis uncharacterized LOC105044535 (LOC105044535), transcript variant X2, mRNA | NA | coding protein | psRNATarget |