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BaseInfo

ncRNA ID novel_egu_miR743
Species Elaeis guineensis
Class miRNA
Genome position Chr7:766272-766396 [+]
Reference genome EG5
Source SRR3042547
Length 21
Mature sequence(if miRNA) 1 - UUGCCGGCUUCACUAUUUAAU - 21
Stem-loop(if miRNA) --                  AAUAGA     UU        AAAAUC        C U    
  UUGCCGGCUUCACUAUUU      UUUUU  AAAAAAUU      AGUGAAGU G CAAUC
  ||||||||||||||||||      |||||  ||||||||      |||||||| | ||||A
  AACGGCCGAAGUGAUAAG      AAAAA  UUUUUUAA      UUACUUCA C GUUAG
UA                  AAUAAA     UU        GUCUUU        A U    
Stem-loop sequence UUGCCGGCUUCACUAUUUAAUAGAUUUUUUUAAAAAAUUAAAAUCAGUGAAGUCGUCAAUCAGAUUGUCAACUUCAUUUUUCUGAAUUUUUUUUAAAAAAAAUAAGAAUAGUGAAGCCGGCAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010922482.2
ncRNA:21   UAAUUUAUCACUUCGGCCGUU   1
  =*|=||*=|||||||||||||
targets:3167   GAUGAACGGUGAAGCCGGCAA   3187

3.0 PREDICTED: Elaeis guineensis uncharacterized LOC105044535 (LOC105044535), transcript variant X2, mRNA NA coding protein psRNATarget