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BaseInfo

ncRNA ID novel_egu_miR741
Species Elaeis guineensis
Class miRNA
Genome position Chr6:14898310-14898401 [-]
Reference genome EG5
Source SRR3042547
Length 23
Mature sequence(if miRNA) 70 - CAAGAGCCGGGAUGAGCUUCCUU - 92
Stem-loop(if miRNA) --     -        G   U     CC  A   -CCG   UUC  CU
  CAAGA GCCGGGAU AGC UCCUU  AG UGG    AUC   CU  U
  ||||| |||||||| ||| |||||  || |||    |||   ||
  GUUCU CGGUCCUA UCG GGGAA  UC ACC    UAG   GA  C
GA     U        G   C     -U  C   UUAA   -UC  CG
Stem-loop sequence CAAGAGCCGGGAUGAGCUUCCUUCCAGAUGGCCGAUCUUCCUCUUCGCAGCUGAUAAUUCCACCUUAAGGGCGCUGAUCCUGGCUUCUUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01031332.1
ncRNA:23   UUCCUUCGAGUAGGGCCGAGAAC   1
  *******||||||||||||||||
targets:194   CCUCUCUCUCAUCCCGGCUCUUG   216

3.0 TSA: Elaeis guineensis Unigene13165_All transcribed RNA sequence NA coding protein psRNATarget