ncRNA ID | novel_egu_miR728 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr4:36834795-36834897 [-] |
Reference genome | EG5 |
Source | SRR3042547 |
Length | 21 |
Mature sequence(if miRNA) | 83 - ACCUGAGCCGUUGGAUCGCGU - 103 |
Stem-loop(if miRNA) |
--    G                  U   CG -------C UG UG      GAA   ACCU AGCCGUUGGAUCGCGUUU GCA  G        G  C  UGGAUG   G   |||| |||||||||||||||||| |||  |        |  |  ||||||   A   UGGA UUGGCAACCUAGCGCAAA CGU  C        C  G  GCUUAU   A GC    G                  -   AU AAAAUUUU GU GU      AAA |
Stem-loop sequence | ACCUGAGCCGUUGGAUCGCGUUUUGCACGGCGUGCUGUGGAUGGAAGAAAAAUAUUCGUGGUGCUUUUAAAACUAUGCAAACGCGAUCCAACGGUUGAGGUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JO088560.1 |
|
2.5 | TSA: Elaeis guineensis isotig01309.Elguifruit mRNA sequence | NA | coding protein | psRNATarget |