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BaseInfo

ncRNA ID novel_egu_miR726
Species Elaeis guineensis
Class miRNA
Genome position Chr4:39390845-39390913 [-]
Reference genome EG5
Source SRR3042547;SRR3042548
Length 21
Mature sequence(if miRNA) 1 - UGCCAAAGGAGAGUUGCCCUG - 21
Stem-loop(if miRNA) --    UC      C        C   GCA   UGU
  GGGC  UUCUUC UUGGCAGG GUU   UGG   U
  ||||  |||||| |||||||| |||   |||
  CCCG  GAGAGG AACCGUCU CGA   ACC   U
GU    UU      A        -   --A   UUC
Stem-loop sequence GGGCUCUUCUUCCUUGGCAGGCGUUGCAUGGUGUUUCUUCCAAAGCUCUGCCAAAGGAGAGUUGCCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019855483.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  ||||||||*||||||||||||
targets:931   CAGGGCAAAUCUCCUUUGGCA   951

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X3, mRNA NA coding protein psRNATarget
XM_019855483.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  |*||||||=||||||||||||
targets:811   CUGGGCAAUUCUCCUUUGGCA   831

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X3, mRNA NA coding protein psRNATarget
XM_019855483.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  |*||||||=||||||||||||
targets:1037   CUGGGCAAUUCUCCUUUGGCA   1057

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X3, mRNA NA coding protein psRNATarget
XM_019855483.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:975   AAGGGCAAAUCUCCUUUGGCA   995

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X3, mRNA NA coding protein psRNATarget
XM_019855483.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:628   GAGGGCAAAUCUCCUUUGGCA   648

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X3, mRNA NA coding protein psRNATarget
XM_019855483.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:893   AAGGGCAAAUCUCCUUUGGCA   913

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X3, mRNA NA coding protein psRNATarget
XM_010919579.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  ||||||||*||||||||||||
targets:931   CAGGGCAAAUCUCCUUUGGCA   951

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010919579.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  |*||||||=||||||||||||
targets:811   CUGGGCAAUUCUCCUUUGGCA   831

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010919579.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  |*||||||=||||||||||||
targets:1037   CUGGGCAAUUCUCCUUUGGCA   1057

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010919579.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:975   AAGGGCAAAUCUCCUUUGGCA   995

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010919579.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:628   GAGGGCAAAUCUCCUUUGGCA   648

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010919579.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:893   AAGGGCAAAUCUCCUUUGGCA   913

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X2, mRNA NA coding protein psRNATarget
XM_010919571.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  ||||||||*||||||||||||
targets:931   CAGGGCAAAUCUCCUUUGGCA   951

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010919571.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  |*||||||=||||||||||||
targets:811   CUGGGCAAUUCUCCUUUGGCA   831

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010919571.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  |*||||||=||||||||||||
targets:1037   CUGGGCAAUUCUCCUUUGGCA   1057

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010919571.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:975   AAGGGCAAAUCUCCUUUGGCA   995

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010919571.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:628   GAGGGCAAAUCUCCUUUGGCA   648

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X1, mRNA NA coding protein psRNATarget
XM_010919571.2
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:893   AAGGGCAAAUCUCCUUUGGCA   913

1.5 PREDICTED: Elaeis guineensis probable ubiquitin-conjugating enzyme E2 24 (LOC105042389), transcript variant X1, mRNA NA coding protein psRNATarget
XM_019851220.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  ||||||||*||||||||||||
targets:418   CAGGGCAAAUCUCCUUUGGCA   438

1.5 PREDICTED: Elaeis guineensis uncharacterized LOC105047412 (LOC105047412), mRNA NA coding protein psRNATarget
XM_019851220.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:461   GAGGGCAAAUCUCCUUUGGCA   481

1.5 PREDICTED: Elaeis guineensis uncharacterized LOC105047412 (LOC105047412), mRNA NA coding protein psRNATarget
XM_019851220.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  =*||||||*||||||||||||
targets:150   UUGGGCAAAUCUCCUUUGGCA   170

1.5 PREDICTED: Elaeis guineensis uncharacterized LOC105047412 (LOC105047412), mRNA NA coding protein psRNATarget
GBSV01030727.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  |*||||||=||||||||||||
targets:588   CUGGGCAAUUCUCCUUUGGCA   608

1.5 TSA: Elaeis guineensis Unigene12560_All transcribed RNA sequence NA coding protein psRNATarget
GBSV01030727.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  *|||||||*||||||||||||
targets:405   GAGGGCAAAUCUCCUUUGGCA   425

1.5 TSA: Elaeis guineensis Unigene12560_All transcribed RNA sequence NA coding protein psRNATarget
XM_019851220.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  |*|||||==||||||||||||
targets:523   CUGGGCAGUUCUCCUUUGGCA   543

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105047412 (LOC105047412), mRNA NA coding protein psRNATarget
XM_019851220.1
ncRNA:21   GUCCCGUUGAGAGGAAACCGU   1
  =|||||||*|||||||||||=
targets:200   UAGGGCAAAUCUCCUUUGGCG   220

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105047412 (LOC105047412), mRNA NA coding protein psRNATarget
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