ncRNA ID | novel_egu_miR724 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr8:37789191-37789378 [+] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUGAAUGACGAAAAUACCUCUAU - 24 |
Stem-loop(if miRNA) |
--    A           ACC   -              A           U   - -     A           -A  AUAUUAUGAUAUUUUAUA   UUUG AUGACGAAAAU   UCU AUUCUUUGAAAAAA UUAUGAUAUUU AUG C AUAUU UGAUAUCUUGC  UU                  G   |||| |||||||||||   ||| |||||||||||||| ||||||||||| ||| | ||||| |||||||||||  ||   AAAU UGCUGCUUUUA   AGA UAAGAAACUUUUUU AAUACUGUAAG UAC G UAUAA ACUGUAGGAUG  GG                  A UA    A           -CA   A              -           C   A A     A           CA  UCUUUCAAUAUUAAAAAU |
Stem-loop sequence | UUUGAAUGACGAAAAUACCUCUAUUCUUUGAAAAAAAUUAUGAUAUUUUAUGCAUAUUAUGAUAUCUUGCAUUAUAUUAUGAUAUUUUAUAGAUAAAAAUUAUAACUUUCUGGACGUAGGAUGUCAAAAUAUAGACAUCGAAUGUCAUAAUUUUUUCAAAGAAUAAGAACAUUUUCGUCGUAUAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019853582.1 |
|
2.5 | PREDICTED: Elaeis guineensis rop guanine nucleotide exchange factor 14 (LOC105053520), transcript variant X2, mRNA | NA | coding protein | psRNATarget |