Search result

BaseInfo

ncRNA ID novel_egu_miR722
Species Elaeis guineensis
Class miRNA
Genome position Chr3:37909822-37909907 [+]
Reference genome EG5
Source SRR3042547
Length 24
Mature sequence(if miRNA) 1 - AGGUUGGAUUUCUGGUCGUAACGA - 24
Stem-loop(if miRNA) --        --      -  C  AACGA      ACCAA     CACC
  AGGUUGGA  UUUCUG GU GU     UCUAAG     GUAUG    C
  ||||||||  |||||| || ||     ||||||     |||||    U
  UUUAACCU  AAAGAC CA CG     AGAUUC     CAUAU    A
UU        UA      A  A  -----      -----     UAAU
Stem-loop sequence AGGUUGGAUUUCUGGUCGUAACGAUCUAAGACCAAGUAUGCACCCUAUAAUUAUACCUUAGAGCAACACAGAAAAUUCCAAUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01039887.1
ncRNA:24   AGCAAUGCUGGUCUUUAGGUUGGA   1
  ||||||||||||*|||||||||||
targets:13   UCGUUACGACCAAAAAUCCAACCU   36

1.5 TSA: Elaeis guineensis Unigene21725_All transcribed RNA sequence NA coding protein psRNATarget