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BaseInfo

ncRNA ID ath-miRf10921-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUGACGGUGGGACGAAUGUU - NA
Stem-loop(if miRNA)    -GG      U        G -           G
UCG   AUUUAG GACGGUGG A CGAAUGUUUCG G
|||   |||||| |||||||| | |||||||||||
AGC   UAAGUU UUGCCACC U GCUUGCGGAGC U
   AUA      C        G A           A
Stem-loop sequence UCGGGAUUUAGUGACGGUGGGACGAAUGUUUCGGGUACGAGGCGUUCGAUGCCACCGUUCUUGAAUAUACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_101777.2
ncRNA:20   UUGUAAGCAGGGUGGCAGUG   1
  ||||||||||||||||||||
targets:134   AACAUUCGUCCCACCGUCAC   153

0.0 Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein mRNA alpha/beta-Hydrolases superfamily protein(AT1G19190) coding protein psRNATarget
BT029511.1
ncRNA:20   UUGUAAGCAGGGUGGCAGUG   1
  ||||||||||||||||||||
targets:81   AACAUUCGUCCCACCGUCAC   100

0.0 Arabidopsis thaliana At1g19190 mRNA, complete cds NA coding protein psRNATarget
NM_111908.5
ncRNA:20   UUGUAAGCAGGGUGGCAGUG   1
  ||=||||||*||||||||||
targets:353   AAUAUUCGUGCCACCGUCAC   372

2.5 Arabidopsis thaliana Plant invertase/pectin methylesterase inhibitor superfamily mRNA Plant invertase/pectin methylesterase inhibitor superfamily(AT3G10720) coding protein psRNATarget
AY034996.1
ncRNA:20   UUGUAAGCAGGGUGGCAGUG   1
  ||=||||||*||||||||||
targets:213   AAUAUUCGUGCCACCGUCAC   232

2.5 Arabidopsis thaliana putative pectinesterase (At3g10720) mRNA, complete cds NA coding protein psRNATarget
BX823988.1
ncRNA:20   UUGUAAGCAGGGUGGCAGUG   1
  ||=||||||*||||||||||
targets:188   AAUAUUCGUGCCACCGUCAC   207

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX822292.1
ncRNA:20   UUGUAAGCAGGGUGGCAGUG   1
  ||=||||||*||||||||||
targets:186   AAUAUUCGUGCCACCGUCAC   205

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget