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BaseInfo

ncRNA ID	novel_egu_miR717
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr2:53853094-53853285 [-]
Reference genome	EG5
Source	SRR3042547
Length	24
Mature sequence(if miRNA)	1 - ACAAGUAGUUUUGAGGUAGUAGAU - 24
Stem-loop(if miRNA)	--UG    A                  CA                        C  AC        C    A  C     UUGA   GC    AUAA     GCUA CUCAAAACUACUUGUACA  AAAAAUUAUAUGAUUUGAAGAUUC UA  CUAUGCAU AAGU GU AAAAA    ACA  CUAA    A     |||| ||||||||||||||||||  |||||||||||||||||||||||| ||  |||||||| |||| || |||||    |||  ||||    A     UGAU GAGUUUUGAUGAACAUGU  UUUUUAAUAUACUAAACUUUUAAG AU  GAUACGUA UUUA UA UUUUU    UGU  GAUU    U UAGA    G                  AA                        U  CA        A    C  U     --UA   -A    AAGU
Stem-loop sequence	UGGCUAACUCAAAACUACUUGUACACAAAAAAUUAUAUGAUUUGAAGAUUCCUAACCUAUGCAUCAAGUAGUCAAAAAUUGAACAGCCUAAAUAAAAUUGAAUUAGAUGUAUUUUUUUAUCAUUUAAUGCAUAGACUAUGAAUUUUCAAAUCAUAUAAUUUUUAAUGUACAAGUAGUUUUGAGGUAGUAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019847239.1	ncRNA:24   UAGAUGAUGGAGUUUUGAUGAACA   1   |||||||=|||||||||||||||| targets:3510   AUCUACUGCCUCAAAACUACUUGU   3533 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019847213.1	ncRNA:24   UAGAUGAUGGAGUUUUGAUGAACA   1   |||||||=|||||||||||||||| targets:3983   AUCUACUGCCUCAAAACUACUUGU   4006 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847185.1	ncRNA:24   UAGAUGAUGGAGUUUUGAUGAACA   1   |||||||=|||||||||||||||| targets:3986   AUCUACUGCCUCAAAACUACUUGU   4009 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01025286.1	ncRNA:24   UAGAUGAUGGAGUUUUGAUGAACA   1   |||-||||=|*||||||||||||* targets:79   AUC-ACUAUCACAAAACUACUUGA   101 Target Full Sequence	3.0	TSA: Elaeis guineensis Unigene7115_All transcribed RNA sequence	NA	coding protein	psRNATarget