ncRNA ID | novel_egu_miR709 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr16:18192784-18192915 [-] |
Reference genome | EG5 |
Source | SRR3042547 |
Length | 24 |
Mature sequence(if miRNA) | 109 - AGAGAGAAAAUGUAGAGAGAAGGU - 132 |
Stem-loop(if miRNA) |
--          U U          U                ----                    UU   AGAGAGAAAA G AGAGAGAAGG AAAGAGAGGAAAGAGA    GAGAAAGGAGAGAGAGGAGA  U   |||||||||| | |||||||||| ||||||||||||||||    ||||||||||||||||||||  U   UCUUUUUUUU C UUUUUUUUCU UUUUUUUUCUUUUUCU    CUCUUUCUUUUUUUUCCUUU  C UU          U -          U                UUUU                    CU |
Stem-loop sequence | AGAGAGAAAAUGUAGAGAGAAGGUAAAGAGAGGAAAGAGAGAGAAAGGAGAGAGAGGAGAUUUUCUCUUUCCUUUUUUUUCUUUCUCUUUUUCUUUUUCUUUUUUUUUUCUUUUUUUUCUUUUUUUUUCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01047799.1 |
|
2.0 | TSA: Elaeis guineensis Unigene29640_All transcribed RNA sequence | NA | coding protein | psRNATarget |