ncRNA ID | novel_egu_miR708 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr16:20156406-20156486 [-] |
Reference genome | EG5 |
Source | SRR3042547 |
Length | 21 |
Mature sequence(if miRNA) | 61 - UUUCAAAAUGAAGUCGGCAAG - 81 |
Stem-loop(if miRNA) |
--        UG                         AAU   UUUCAAAA  AAGUCGGCAAGUGGUUUGCUGACUU   U   ||||||||  |||||||||||||||||||||||||   A   AAAGUUUU  UUCAGCCGUUCACCAAACGGCUGAA   A AA        GU                         GUG |
Stem-loop sequence | UUUCAAAAUGAAGUCGGCAAGUGGUUUGCUGACUUAAUUAAGUGAAGUCGGCAAACCACUUGCCGACUUUGUUUUGAAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01011317.1 |
|
3.0 | TSA: Elaeis guineensis CL4042.Contig3_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01011316.1 |
|
3.0 | TSA: Elaeis guineensis CL4042.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget |