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BaseInfo

ncRNA ID novel_egu_miR699
Species Elaeis guineensis
Class miRNA
Genome position Chr13:21430603-21430680 [+]
Reference genome EG5
Source SRR3042547;SRR3042548
Length 21
Mature sequence(if miRNA) 58 - CUGAAGUGUUUGGGGGAACUC - 78
Stem-loop(if miRNA) --                  -------   GG      U   C
  GUUCCCUCAGACACUUCA       UCA  GCUCUC CUU A
  ||||||||||||||||||       |||  |||||| ||| C
  CAAGGGGGUUUGUGAAGU       AGU  CGAGGG GAG U
CU                  CAUCUCA   -A      -   G
Stem-loop sequence GUUCCCUCAGACACUUCAUCAGGGCUCUCUCUUCACUGGAGGGGAGCAUGAACUCUACUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019848862.1
ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1
  |||||||=||||||||||||*
targets:767   GAGUUCCUCCAAACACUUCAU   787

2.0 PREDICTED: Elaeis guineensis ATP sulfurylase 1, chloroplastic-like (LOC105042220), mRNA NA coding protein psRNATarget
GBSV01019820.1
ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1
  *=|||||*||||||||||||*
targets:2830   AGGUUCCACCAAACACUUCAA   2850

2.0 TSA: Elaeis guineensis Unigene1648_All transcribed RNA sequence NA coding protein psRNATarget