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BaseInfo

ncRNA ID novel_egu_miR689
Species Elaeis guineensis
Class miRNA
Genome position Chr9:23573108-23573190 [+]
Reference genome EG5
Source SRR3042545
Length 22
Mature sequence(if miRNA) 62 - CUAUGAGAUUUGAGCUGGGCCA - 83
Stem-loop(if miRNA) -    -   C      C           AAA      G    C
 GGCC GGC CAAAUC CAUAGGGAGAA   GAAAAG ACCU A
 |||| ||| |||||| |||||||||||   |||||| ||||
 CCGG UCG GUUUAG GUAUCCUUCUU   UUUUUC UGGA G
A    G   A      A           ---      G    C
Stem-loop sequence GGCCGGCCCAAAUCCCAUAGGGAGAAAAAGAAAAGGACCUCAGCAGGUGCUUUUUUUCUUCCUAUGAGAUUUGAGCUGGGCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01050035.1
ncRNA:22   ACCGGGUCGAGUUUAGAGUAUC   1
  ||||||||||||||||||||||
targets:129   UGGCCCAGCUCAAAUCUCAUAG   150

0.0 TSA: Elaeis guineensis Unigene31877_All transcribed RNA sequence NA coding protein psRNATarget