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BaseInfo

ncRNA ID novel_egu_miR688
Species Elaeis guineensis
Class miRNA
Genome position Chr8:15093513-15093555 [-]
Reference genome EG5
Source SRR3042542
Length 21
Mature sequence(if miRNA) 23 - UGAAUGUUGGAGAUGGAAGCA - 43
Stem-loop(if miRNA) --    U       A     GC
  UGAA GUUGGAG UGGAA  A
  |||| ||||||| |||||
  AUUU CGAUCUU AUCUU  U
AG    -       G     AU
Stem-loop sequence UGAAUGUUGGAGAUGGAAGCAUUAUUCUAGUUCUAGCUUUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010924553.2
ncRNA:21   ACGAAGGUAGAGGUUGUAAGU   1
  ***||||||||||||*|||||
targets:5876   CUAUUCCAUCUCCAAAAUUCA   5896

2.5 PREDICTED: Elaeis guineensis protein MOR1-like (LOC105046061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_019850853.1
ncRNA:21   ACGAAGGUAGAGGUUGUAAGU   1
  ***||||||||||||*|||||
targets:5867   CUAUUCCAUCUCCAAAAUUCA   5887

2.5 PREDICTED: Elaeis guineensis protein MOR1-like (LOC105046061), transcript variant X2, mRNA NA coding protein psRNATarget