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BaseInfo

ncRNA ID novel_egu_miR685
Species Elaeis guineensis
Class miRNA
Genome position Chr8:16674220-16674281 [-]
Reference genome EG5
Source SRR3042545
Length 24
Mature sequence(if miRNA) 39 - AGGACCUGUUUGAUUGCAUCUAGA - 62
Stem-loop(if miRNA) -A   C        UU   --      AGG  G
  GGA CUGUUUGA  GCA  UCUAGA   GA A
  ||| ||||||||  |||  ||||||   ||
  UCU GAUAAAUU  CGU  AGAUUU   UU G
AA   U        --   UC      -AA  A
Stem-loop sequence AGGACCUGUUUGAUUGCAUCUAGAAGGGAGAGAUUAAUUUAGACUUGCUUAAAUAGUUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01043317.1
ncRNA:24   AGAUCUACGUUAGUUUGUCCAGGA   1
  |||**||||=|||||||||*||||
targets:259   UCUCCAUGCGAUCAAACAGCUCCU   282

2.5 TSA: Elaeis guineensis Unigene25158_All transcribed RNA sequence NA coding protein psRNATarget