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BaseInfo

ncRNA ID	novel_egu_miR669
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr7:2494403-2494524 [-]
Reference genome	EG5
Source	SRR3042545;SRR3042547
Length	21
Mature sequence(if miRNA)	102 - AGAGGAGGGAGGGGAAGGCAG - 122
Stem-loop(if miRNA)	--                               G  -----       C     A  ACCCAAA   AGAGGAGGGAGGGGAAGGCAGUGGGGAGGCC CU     GAAUAGC GACGG CU       A   ||||||||||||||||||||||||||||||| ||     ||||||| ||||| ||       C   UCUCCUCCCUCCCCUUCCGUCACCCCUUCGG GA     CUUGUUG CUGUC GA       A CC                               G  CAAAG       -     -  CGUCCCC
Stem-loop sequence	AGAGGAGGGAGGGGAAGGCAGUGGGGAGGCCGCUGAAUAGCCGACGGACUACCCAAAACACCCCUGCAGCUGUCGUUGUUCGAAACAGGGGCUUCCCCACUGCCUUCCCCUCCCUCCUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010908012.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   =|*|||||||||||||||||| targets:246   UUUCCUUCCCCUCCCUCCUCU   266 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis uridine 5'-monophosphate synthase-like (LOC105033278), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010908013.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   =|*|||||||||||||||||| targets:246   UUUCCUUCCCCUCCCUCCUCU   266 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis uridine 5'-monophosphate synthase-like (LOC105033278), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010944922.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   ||||||||=|||||||||||| targets:123   CUGCCUUCUCCUCCCUCCUCU   143 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis uncharacterized LOC105061012 (LOC105061012), mRNA	NA	coding protein	psRNATarget
XM_010908318.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   **|||||||||*||||||||| targets:372   GCGCCUUCCCCACCCUCCUCU   392 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis beta-fructofuranosidase 1-like (LOC105033487), mRNA	NA	coding protein	psRNATarget
XM_010929622.1	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   ||*||*||||||||||||||| targets:6   CUCCCCUCCCCUCCCUCCUCU   26 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis cyclin-D6-1 (LOC105049849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010929629.1	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   ||*||*||||||||||||||| targets:6   CUCCCCUCCCCUCCCUCCUCU   26 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis cyclin-D6-1 (LOC105049849), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010917890.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   =**|||||=|||||||||||| targets:31   UACCCUUCUCCUCCCUCCUCU   51 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105041089 (LOC105041089), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019849518.1	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   =**|||||=|||||||||||| targets:32   UACCCUUCUCCUCCCUCCUCU   52 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105041089 (LOC105041089), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010906596.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   |||||*|||||*||||||||| targets:646   CUGCCCUCCCCGCCCUCCUCU   666 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis receptor-like protein kinase HSL1 (LOC105032217), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010933207.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   =*||||||||=|||||||||* targets:204   UCGCCUUCCCUUCCCUCCUCA   224 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At2g40720 (LOC105052409), mRNA	NA	coding protein	psRNATarget
XM_010929910.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   =*||||||=|||||||||||* targets:302   UCGCCUUCUCCUCCCUCCUCC   322 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At3g62890-like (LOC105050055), mRNA	NA	coding protein	psRNATarget
XM_010926878.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   |**|||||=|||||||||||| targets:719   CCACCUUCUCCUCCCUCCUCU   739 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At2g13600-like (LOC105047789), mRNA	NA	coding protein	psRNATarget
XM_010919694.2	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   |**|||||=|||||||||||| targets:432   CCCCCUUCUCCUCCCUCCUCU   452 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105042464 (LOC105042464), mRNA	NA	coding protein	psRNATarget
XM_019850014.1	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   ***|||||||||||=|||||| targets:23   GACCCUUCCCCUCCUUCCUCU   43 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis cysteine-rich repeat secretory protein 15 (LOC105043599), mRNA	NA	coding protein	psRNATarget
GBSV01049593.1	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   |**|||||=|||||||||||| targets:398   CCACCUUCUCCUCCCUCCUCU   418 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene31435_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01042904.1	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   =**|||||=|||||||||||| targets:23   UACCCUUCUCCUCCCUCCUCU   43 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene24745_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01048613.1	ncRNA:21   GACGGAAGGGGAGGGAGGAGA   1   =*||||||||=|||||||||* targets:110   UCGCCUUCCCUUCCCUCCUCA   130 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene30454_All transcribed RNA sequence	NA	coding protein	psRNATarget