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BaseInfo

ncRNA ID novel_egu_miR667
Species Elaeis guineensis
Class miRNA
Genome position Chr7:6167193-6167242 [-]
Reference genome EG5
Source SRR3042545
Length 24
Mature sequence(if miRNA) 1 - AGUCUCUGACAGUAGUACGGUGAU - 24
Stem-loop(if miRNA) --U    CA            -   U
   GCCG  UGCUGUUGUCAG GAC G
   ||||  |||||||||||| ||| A
   UGGC  AUGAUGACAGUC CUG C
UAG    --            U   A
Stem-loop sequence UGCCGCAUGCUGUUGUCAGGACUGACAGUCUCUGACAGUAGUACGGUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01017553.1
ncRNA:24   UAGUGGCAUGAUGACAGUCUCUGA   1
  |||==||||||||||*||||||||
targets:434   AUCGUCGUACUACUGCCAGAGACU   457

1.5 TSA: Elaeis guineensis CL6671.Contig2_All transcribed RNA sequence NA coding protein psRNATarget