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BaseInfo

ncRNA ID novel_egu_miR665
Species Elaeis guineensis
Class miRNA
Genome position Chr7:552527-552570 [+]
Reference genome EG5
Source SRR3042545
Length 20
Mature sequence(if miRNA) 1 - UGAUGAGAUGUUGGAAUUAU - 20
Stem-loop(if miRNA) UGAUGA   ---G     A    U
      GAU    UUGGA UUAU U
      |||    ||||| ||||
      CUA    AACCU AAUA A
---CCA   AUUA     A    A
Stem-loop sequence UGAUGAGAUGUUGGAAUUAUUUAAAUAAAUCCAAAUUAAUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01021577.1
ncRNA:20   UAUUAAGGUUGUAGAGUAGU   1
  |*|||||||||||||||||=
targets:1100   ACAAUUCCAACAUCUCAUCG   1119

2.0 TSA: Elaeis guineensis Unigene3405_All transcribed RNA sequence NA coding protein psRNATarget
XM_010916416.2
ncRNA:20   UAUUAAGGUUGUAGAGUAGU   1
  *|||||||||||||||*||*
targets:66   CUAAUUCCAACAUCUCUUCU   85

2.5 PREDICTED: Elaeis guineensis autophagy-related protein 8i (LOC105040035), mRNA NA coding protein psRNATarget