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BaseInfo

ncRNA ID novel_egu_miR664
Species Elaeis guineensis
Class miRNA
Genome position Chr6:18047481-18047548 [-]
Reference genome EG5
Source SRR3042545
Length 24
Mature sequence(if miRNA) 1 - AUAUUUUAAAUAGGAUUAGUUGAU - 24
Stem-loop(if miRNA) --UAU              UUA      AAA  U
     UUAAUUUUAUUUAA   AUUAAA   AU G
     ||||||||||||||   ||||||   || A
     GAUUAGGAUAAAUU   UAAUUU   UA U
UAGUU              UUA      -AG  U
Stem-loop sequence UAUUUAAUUUUAUUUAAUUAAUUAAAAAAAUUGAUUAUGAUUUAAUAUUUUAAAUAGGAUUAGUUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01039283.1
ncRNA:24   UAGUUGAUUAGGAUAAAUUUUAUA   1
  ||||=|||||||||||||||||||
targets:106   AUCAGCUAAUCCUAUUUAAAAUAU   129

0.0 TSA: Elaeis guineensis Unigene21120_All transcribed RNA sequence NA coding protein psRNATarget