ncRNA ID | novel_egu_miR663 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:27197712-27197855 [-] |
Reference genome | EG5 |
Source | SRR3042545 |
Length | 24 |
Mature sequence(if miRNA) | 121 - UUCGAAUGAUAUGCGGAGGGUUCG - 144 |
Stem-loop(if miRNA) |
--U                  - UU          A    A                            AUUU    UCGAAUGAUAUGCGGAGG G  CGAGAGAAAU UCGG CAGUAUUUUUCUUUAGUUCUUCUCACAC    U    |||||||||||||||||| |  |||||||||| |||| ||||||||||||||||||||||||||||    AGUUUACUAUACGUUUUC C  GCUUUUUUUA AGCC GUCAUAAAAAGAAAUCAAGAGGGGUGUG    C AUU                  U UG          A    -                            CUGA |
Stem-loop sequence | UUCGAAUGAUAUGCGGAGGGUUCGAGAGAAAUAUCGGACAGUAUUUUUCUUUAGUUCUUCUCACACAUUUUCAGUCGUGUGGGGAGAACUAAAGAAAAAUACUGCCGAAAUUUUUUUCGGUCUCUUUUGCAUAUCAUUUGAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010913907.2 |
|
2.0 | PREDICTED: Elaeis guineensis DDT domain-containing protein PTM (LOC105038189), transcript variant X1, mRNA | NA | coding protein | psRNATarget |