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BaseInfo

ncRNA ID ahy-miR3510
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 22
Mature sequence(if miRNA) NA - UUAUACCAUCUUGCGAGACUGA - NA
Stem-loop(if miRNA) CAAA     --        A   U   GC     UG  CG
    UGGCU  UGGUUUAU CCA CUU  GAGAC  AA  A
    |||||  |||||||| ||| |||  |||||  ||
    AUCGA  ACCGAGUA GGU GGA  UUUUG  UU  G
----     UU        -   U   --     GU  UA
Stem-loop sequence CAAAUGGCUUGGUUUAUACCAUCUUGCGAGACUGAACGAGAUUUUGGUUUUAGGUUGGAUGAGCCAUUAGCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01045856.1
ncRNA:22   AGUCAGAGCGUUCUACCAUAUU   1
  ||||||||||||||||*|||||
targets:17   UCAGUCUCGCAAGAUGAUAUAA   38

1.5 TSA: Arachis hypogaea Unigene45890 mRNA sequence NA coding protein psRNATarget
GAER01045856.1
ncRNA:22   AGUCAGAGCGUUCUACCAUAUU   1
  ||||||||||||||||*|||||
targets:81   UCAGUCUCGCAAGAUGAUAUAA   102

1.5 TSA: Arachis hypogaea Unigene45890 mRNA sequence NA coding protein psRNATarget
GAER01024946.1
ncRNA:22   AGUCAGAGCGUUCUACCAUAUU   1
  **=|||||*||||||||*||||
targets:303   GGGGUCUCCCAAGAUGGCAUAA   324

2.5 TSA: Arachis hypogaea Unigene24963 mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).