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BaseInfo

ncRNA ID novel_egu_miR660
Species Elaeis guineensis
Class miRNA
Genome position Chr6:37053465-37053508 [+]
Reference genome EG5
Source SRR3042545
Length 21
Mature sequence(if miRNA) 1 - UGGUAAUCUAGAUUGUCUCAU - 21
Stem-loop(if miRNA) --U                  A
   GGUAAUCUAGAUUGUCUC U
   ||||||||||||||||||
   UCGUUAGGUCUAACAGAG G
GUU                  A
Stem-loop sequence UGGUAAUCUAGAUUGUCUCAUGAGAGACAAUCUGGAUUGCUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01015730.1
ncRNA:21   UACUCUGUUAGAUCUAAUGGU   1
  |*|||||*|||||||||||||
targets:45   AAGAGACCAUCUAGAUUACCA   65

1.0 TSA: Elaeis guineensis CL5851.Contig1_All transcribed RNA sequence NA coding protein psRNATarget