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BaseInfo

ncRNA ID	novel_egu_miR657
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr6:8894696-8894772 [-]
Reference genome	EG5
Source	SRR3042545;SRR3042547
Length	20
Mature sequence(if miRNA)	58 - AGGCCCUUCCUCUAGCGCCA - 77
Stem-loop(if miRNA)	--A  -      --       GCCAA    G UG   -   AA    GG CCCUUC  CUCUAGC     UUCU U  GUG CAG  U    || ||||||  |||||||     |||| |  ||| |||  U    CU GGGGAG  GAGGUCG     AAGA G  CAC GUC  U GCG  A      CU       -----    - GU   A   GU
Stem-loop sequence	AGGCCCUUCCUCUAGCGCCAAUUCUGUUGGUGCAGAAUUUUGCUGACACUGGAGAAGCUGGAGUCGAGGGGAUCGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010918004.2	ncRNA:20   ACCGCGAUCUCCUUCCCGGA   1   |*||*=|||||||||||||| targets:19   UAGCAUUAGAGGAAGGGCCU   38 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis peptidyl-prolyl cis-trans isomerase FKBP42 (LOC105041156), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010918003.2	ncRNA:20   ACCGCGAUCUCCUUCCCGGA   1   |*||*=|||||||||||||| targets:19   UAGCAUUAGAGGAAGGGCCU   38 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis peptidyl-prolyl cis-trans isomerase FKBP42 (LOC105041156), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010918001.2	ncRNA:20   ACCGCGAUCUCCUUCCCGGA   1   |*||*=|||||||||||||| targets:19   UAGCAUUAGAGGAAGGGCCU   38 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis peptidyl-prolyl cis-trans isomerase FKBP42 (LOC105041156), transcript variant X1, mRNA	NA	coding protein	psRNATarget