ncRNA ID | novel_egu_miR655 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr10:31321773-31321915 [-] |
Reference genome | EG5 |
Source | SRR3042545;SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 120 - UUCGAAUGAUAUGCGGAGGGUUCG - 143 |
Stem-loop(if miRNA) |
--U                -   UU     A        AAC            -             CAUUU    UCGAAUGAUAUGCGGA GGG  CGAGA AAAUUUCG   AGUAUUUUUUUU AGUUCUCCUCACA     U    |||||||||||||||| |||  ||||| ||||||||   |||||||||||| |||||||||||||    AGUUUACUAUGCGUUU CCC  GCUUU UUUAAAGC   UCAUAAAAAAGA UCAAGAGGGGUGU     C AUU                U   UG     C        -CC            A             ACUGA |
Stem-loop sequence | UUCGAAUGAUAUGCGGAGGGUUCGAGAAAAAUUUCGAACAGUAUUUUUUUUAGUUCUCCUCACACAUUUUCAGUCAUGUGGGGAGAACUAAGAAAAAAUACUCCCGAAAUUUCUUUCGGUCCCUUUUGCGUAUCAUUUGAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010913907.2 |
|
2.0 | PREDICTED: Elaeis guineensis DDT domain-containing protein PTM (LOC105038189), transcript variant X1, mRNA | NA | coding protein | psRNATarget |