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BaseInfo

ncRNA ID	novel_egu_miR653
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr5:9491028-9491167 [-]
Reference genome	EG5
Source	SRR3042545
Length	22
Mature sequence(if miRNA)	119 - UUAGGUUCAGGAAGUAAUGGUG - 140
Stem-loop(if miRNA)	--UU   UU            G  C         UG        A  -     AUAGAAU   CCU             AGG  CAGGAAGUAAUG UG AGCCAAGGA  ACUUGCCG CC CUUCU       UCU   GUUCCUCCU     |||  |||||||||||| || |||||||||  |||||||| || |||||       |||   ||||||||U     UCC  GUCCUUUAUUAC AC UCGGUUCCU  UGAACGGC GG GAAGA       AGA   UAAGGAGGU GUAC   UC            -  A         GU        C  A     -------   UUU
Stem-loop sequence	UUAGGUUCAGGAAGUAAUGGUGCAGCCAAGGAUGACUUGCCGACCCUUCUAUAGAAUUCUCCUGUUCCUCCUUUGGAGGAAUUUUAGAAGAAGAGGCCGGCAAGUUGUCCUUGGCUACACAUUAUUUCCUGCUCCUCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01011258.1	ncRNA:22   GU-GGUAAUGAAGGACUUGGAUU   1   ||-|||||*|||||||||*|||| targets:1098   CAUCCAUUUCUUCCUGAAGCUAA   1120 Target Full Sequence	2.5	TSA: Elaeis guineensis CL4020.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_019851025.1	ncRNA:22   GU-GGUAAUGAAGGACUUGGAUU   1   ||-|||||*|||||||||*|||| targets:1218   CAUCCAUUUCUUCCUGAAGCUAA   1240 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105047090 (LOC105047090), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019851026.1	ncRNA:22   GU-GGUAAUGAAGGACUUGGAUU   1   ||-|||||*|||||||||*|||| targets:1489   CAUCCAUUUCUUCCUGAAGCUAA   1511 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105047090 (LOC105047090), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010925889.2	ncRNA:22   GU-GGUAAUGAAGGACUUGGAUU   1   ||-|||||*|||||||||*|||| targets:1490   CAUCCAUUUCUUCCUGAAGCUAA   1512 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105047090 (LOC105047090), transcript variant X1, mRNA	NA	coding protein	psRNATarget