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BaseInfo

ncRNA ID novel_egu_miR652
Species Elaeis guineensis
Class miRNA
Genome position Chr5:22676192-22676383 [-]
Reference genome EG5
Source SRR3042545
Length 21
Mature sequence(if miRNA) 1 - UGUGUAGAAAGUCAUAAUUUC - 21
Stem-loop(if miRNA) --      A            A  U                          AU    AA   A             U     AU      -C   AA
  AAUUAU ACUUUCUGCACA GA GUCAUAAUUUUUUUACAGGAUGUCGU  AGAG  AAG AUAUUUUUAUCAU AAAAA  UAAUUU  CAA  U
  |||||| |||||||||||| || ||||||||||||||||||||||||||  ||||  ||| ||||||||||||| |||||  ||||||  |||  U
  UUAAUA UGAAAGAUGUGU CU CAGUAUUAAAAAAGUGUCCUACAGUA  UCUC  UUC UGUAAAAGUAGUA UUUUU  AUUAAA  GUU  A
CU      C            C  C                          CU    CC   C             C     --      AA   CU
Stem-loop sequence AAUUAUAACUUUCUGCACAAGAUGUCAUAAUUUUUUUACAGGAUGUCGUAUAGAGAAAAGAAUAUUUUUAUCAUUAAAAAAUUAAUUUCCAAAAUUAUCUUGAAAAAUUAUUUUUCAUGAUGAAAAUGUCCUUCCCUCUUCAUGACAUCCUGUGAAAAAAUUAUGACCUCCUGUGUAGAAAGUCAUAAUUUC