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BaseInfo

ncRNA ID ath-miRf10914-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UGGGGCUUUGAGAUUUUCUGG - NA
Stem-loop(if miRNA)      G                 U       G     G      UUUCUCUGGCCAAUAUUGAAAGG
UCAUU GAUUUGGGGCUUUGAGA UUUCUGG CCAUC CCACAC                       U
||||| ||||||||||||||||| ||||||| ||||| ||||||                       G
AGUAA CUAAACCCCGAAACUCU AAAGACC GGUAG GUUGGG                       U
     A                 U       G     -      UUUAGACAAUUUCCAACGGCUGG
Stem-loop sequence UCAUUGGAUUUGGGGCUUUGAGAUUUUCUGGGCCAUCGCCACACUUUCUCUGGCCAAUAUUGAAAGGUGUGGUCGGCAACCUUUAACAGAUUUGGGUUGGAUGGGCCAGAAAUUCUCAAAGCCCCAAAUCAAAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001344991.1
ncRNA:21   GGUCUUUUAGAGUUUCGGGGU   1
  |||||||||||||||||||=|
targets:321   CCAGAAAAUCUCAAAGCCCUA   341

1.5 Arabidopsis thaliana SNARE-like superfamily protein partial mRNA SNARE-like superfamily protein(AT5G52270) coding protein psRNATarget
NM_001344992.1
ncRNA:21   GGUCUUUUAGAGUUUCGGGGU   1
  |||||||||||||||||||=|
targets:326   CCAGAAAAUCUCAAAGCCCUA   346

1.5 Arabidopsis thaliana SNARE-like superfamily protein mRNA SNARE-like superfamily protein(AT5G52270) coding protein psRNATarget
BT006338.1
ncRNA:21   GGUCUUUUAGAGUUUCGGGGU   1
  **||||||||||||||||=||
targets:279   GAAGAAAAUCUCAAAGCCUCA   299

1.5 Arabidopsis thaliana At1g65844 gene, complete cds NA coding protein psRNATarget
AK119119.1
ncRNA:21   GGUCUUUUAGAGUUUCGGGGU   1
  **||||||||||||||||=||
targets:295   GAAGAAAAUCUCAAAGCCUCA   315

1.5 Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL21-47-L11 NA coding protein psRNATarget
AK117148.1
ncRNA:21   GGUCUUUUAGAGUUUCGGGGU   1
  **||||||||||||||||=||
targets:316   GAAGAAAAUCUCAAAGCCUCA   336

1.5 Arabidopsis thaliana mRNA for Arabidopsis thaliana unknown protein, complete cds, clone: RAFL16-69-C24 NA coding protein psRNATarget
NM_179515.2
ncRNA:21   GGUCUUUUAGAGUUUCGGGGU   1
  **||||||||||||||||=||
targets:420   GAAGAAAAUCUCAAAGCCUCA   440

1.5 Arabidopsis thaliana transmembrane protein mRNA transmembrane protein(AT1G65845) coding protein psRNATarget
AK230375.1
ncRNA:21   GGUCUUUUAGAGUUUCGGGGU   1
  **||||||||||||||||=||
targets:1802   GAAGAAAAUCUCAAAGCCUCA   1822

1.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-27-B08 NA coding protein psRNATarget