ncRNA ID | novel_egu_miR650 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr4:41725898-41725996 [-] |
Reference genome | EG5 |
Source | SRR3042545 |
Length | 21 |
Mature sequence(if miRNA) | 79 - GAAUGUUGUCUGGCUCGAGGU - 99 |
Stem-loop(if miRNA) |
--     UU      CU    G   A  UCCCUGCAGAGUUUUUUUUUCC   GAAUG  GUCUGG  CGAG UCU UA                      C   |||||  ||||||  |||| ||| ||   CUUAC  CGGACC  GCUC AAA GA                      C CC     UU      AG    U   -  AAGUGGUCCUCUGUACAUCCAU |
Stem-loop sequence | GAAUGUUGUCUGGCUCGAGGUCUAUAUCCCUGCAGAGUUUUUUUUUCCCCUACCUACAUGUCUCCUGGUGAAAGAAAUCUCGGACCAGGCUUCAUUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019855414.1 |
|
2.5 | PREDICTED: Elaeis guineensis calcium-dependent protein kinase 26 (LOC105059338), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010942602.1 |
|
2.5 | PREDICTED: Elaeis guineensis calcium-dependent protein kinase 26 (LOC105059338), transcript variant X2, mRNA | NA | coding protein | psRNATarget |