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BaseInfo

ncRNA ID ath-miRf10913-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AUGAUGCGCAAAUGCGGAUA - NA
Stem-loop(if miRNA) GUAU  A                     C  U   A    G   AA   ACCAAUA  GGU    AGCGAAA   AC
    GA AUGAUGCGCAAAUGCGGAUAU AA GUA AUCA GAC  CAA       GA   GCUC       ACA  A
    || ||||||||||||||||||||| || ||| |||| |||  |||       ||   ||||       |||
    CU UACUACGCGUUUACGCCUAUA UU CAU UAGU CUG  GUU       CU   UGGG       UGU  A
CAGU  C                     U  C   A    A   GG   ACAAAGA  AUU    --AAAAG   AA
Stem-loop sequence GUAUGAAAUGAUGCGCAAAUGCGGAUAUCAAUGUAAAUCAGGACAACAAACCAAUAGAGGUGCUCAGCGAAAACAACAAAAUGUGAAAAGGGUUUAUCAGAAACAUUGGGGUCAUGAUAUACCUUUAUAUCCGCAUUUGCGCAUCAUCUCUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT010457.1
ncRNA:20   AUAGGCGUAAACGCGUAGUA   1
  ||||=|||||||||||||*|
targets:1886   UAUCUGCAUUUGCGCAUCUU   1905

2.5 Arabidopsis thaliana ribonuclease II-related protein (At5g02250) mRNA, complete cds NA coding protein psRNATarget
BX832316.1
ncRNA:20   AUAGGCGUAAACGCGUAGUA   1
  ||||=|||||||||||||*|
targets:2005   UAUCUGCAUUUGCGCAUCUU   2024

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AK176383.1
ncRNA:20   AUAGGCGUAAACGCGUAGUA   1
  ||||=|||||||||||||*|
targets:1944   UAUCUGCAUUUGCGCAUCUU   1963

2.5 Arabidopsis thaliana mRNA for ribonuclease II-like protein, complete cds, clone: RAFL24-09-I17 NA coding protein psRNATarget
NM_120303.5
ncRNA:20   AUAGGCGUAAACGCGUAGUA   1
  ||||=|||||||||||||*|
targets:2011   UAUCUGCAUUUGCGCAUCUU   2030

2.5 Arabidopsis thaliana Ribonuclease II/R family protein (EMB2730), mRNA Ribonuclease II/R family protein(EMB2730) coding protein psRNATarget