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BaseInfo

ncRNA ID	novel_egu_miR640
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr3:18135378-18135579 [+]
Reference genome	EG5
Source	SRR3042545;SRR3042548
Length	24
Mature sequence(if miRNA)	179 - UUUGAGGUAGUAGAUCAUAUCCAA - 202
Stem-loop(if miRNA)	--AA                   --C                            AG         ------      AG A        UUAG  A C    A  A     AUAUGAUCUACUACCUCAA   UAUUUGCACAUAAAAAAUCAUAUGAUUU  AGACCCCUA      GCAUCA  U GUCAAAAA    AC G CUAA UA A     |||||||||||||||||||   ||||||||||||||||||||||||||||  |||||||||      ||||||  | ||||||||    || | |||| || A     UAUACUAGAUGAUGGAGUU   AUGAACGUGUGUUUUUUAGUAUACUAAA  UCUGGGGAU      CGUAGU  A UAGUUUUU    UG C GAUU AU A AACC                   UUA                            CU         AAGAUA      GA C        --UA  - A    A  U
Stem-loop sequence	AAAUAUGAUCUACUACCUCAACUAUUUGCACAUAAAAAAUCAUAUGAUUUAGAGACCCCUAGCAUCAAGUAGUCAAAAAUUAGACAGCCUAAAUAAAAAUUAAUUAGACGUAUUUUUUGAUCAAGUGAUGCAUAGAAUAGGGGUCUUCAAAUCAUAUGAUUUUUUGUGUGCAAGUAAUUUUGAGGUAGUAGAUCAUAUCCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019847239.1	ncRNA:24   AACCUAUACUAGAUGAUGGAGUUU   1   ||**||=|||||||||=||||||| targets:3501   UUAAAUGUGAUCUACUGCCUCAAA   3524 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019847213.1	ncRNA:24   AACCUAUACUAGAUGAUGGAGUUU   1   ||**||=|||||||||=||||||| targets:3974   UUAAAUGUGAUCUACUGCCUCAAA   3997 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847185.1	ncRNA:24   AACCUAUACUAGAUGAUGGAGUUU   1   ||**||=|||||||||=||||||| targets:3977   UUAAAUGUGAUCUACUGCCUCAAA   4000 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X1, mRNA	NA	coding protein	psRNATarget