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BaseInfo

ncRNA ID	novel_egu_miR627
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:64013721-64013918 [-]
Reference genome	EG5
Source	SRR3042545;SRR3042547;SRR3042548
Length	21
Mature sequence(if miRNA)	178 - UUUGUGUGAAAGAAUGAUUGA - 198
Stem-loop(if miRNA)	--                             CA                  UG   U    --                 GU       G  -   UG      UUUGUGUGAAAGAAUGAUUGAUUUUCUUU  UGACCUCAACCAUUGGAU  UGC UUGC  ACCUUUCAAAGCAUGAU  GAGCUUU UG AUU  UCCU   |||||||||||||||||||||||||||||  ||||||||||||||||||  ||| ||||  |||||||||||||||||  ||||||| || |||  |||G   AAGCACGCUUUCUUACUAAUUAGAAGAAA  GUUGGAGUUGGUGACCUA  ACG AACG  UGGAAAGUUUCGUACUG  UUUGGAG AC UAG  GGGU GA                             AC                  GU   U    UG                 --       A  G   GU
Stem-loop sequence	UUUGUGUGAAAGAAUGAUUGAUUUUCUUUCAUGACCUCAACCAUUGGAUUGUGCUUUGCACCUUUCAAAGCAUGAUGUGAGCUUUGUGAUUUGUCCUGUGGGUGGAUGCAAGAGGUUUGUCAUGCUUUGAAAGGUGUGCAAUGCAUGAUCCAGUGGUUGAGGUUGCAAAAGAAGAUUAAUCAUUCUUUCGCACGAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019848015.1	ncRNA:21   AGUUAGUAAGAAAGUGUGUUU   1   |||||||*||||||||||||| targets:1196   UCAAUCACUCUUUCACACAAA   1216 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis gamma-glutamylcyclotransferase 2-1 (LOC105039351), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010915489.2	ncRNA:21   AGUUAGUAAGAAAGUGUGUUU   1   |||||||*||||||||||||| targets:1017   UCAAUCACUCUUUCACACAAA   1037 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis gamma-glutamylcyclotransferase 2-1 (LOC105039351), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010907634.2	ncRNA:21   AGUUAGUAAGAAAGUGUGUUU   1   |=||||||||||||=|||||| targets:3873   UUAAUCAUUCUUUCGCACAAA   3893 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis uncharacterized LOC105033009 (LOC105033009), mRNA	NA	coding protein	psRNATarget
XM_019853922.1	ncRNA:21   AGUUAGUAAGAAAGUGUGUUU   1   ||||||||||||*|||||||| targets:3120   UCAAUCAUUCUUCCACACAAA   3140 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis putative wall-associated receptor kinase-like 16 (LOC105054854), mRNA	NA	coding protein	psRNATarget
XM_010906919.2	ncRNA:21   AGUUAGUAAGAAAGUGUGUUU   1   |*||||||||||||||||=|| targets:722   UGAAUCAUUCUUUCACACGAA   742 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis phytohormone-binding protein-like (LOC105032463), mRNA	NA	coding protein	psRNATarget
XM_010921004.2	ncRNA:21   AGUUAGUAAGAAAGUGUGUUU   1   |***||||||||||||||||| targets:370   UACUUCAUUCUUUCACACAAA   390 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis serine/arginine-rich splicing factor RS31 (LOC105043456), mRNA	NA	coding protein	psRNATarget
GBSV01045929.1	ncRNA:21   AGUUAGUAAGAAAGUGUGUUU   1   *=|||=|||*||||||||||| targets:59   AUAAUUAUUGUUUCACACAAA   79 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene27770_All transcribed RNA sequence	NA	coding protein	psRNATarget