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BaseInfo

ncRNA ID	novel_egu_miR611
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr15:19240116-19240306 [+]
Reference genome	EG5
Source	SRR3042545
Length	24
Mature sequence(if miRNA)	168 - ACAAGUAGUUUUGAGGUAGUAGAU - 191
Stem-loop(if miRNA)	--                     C   CAA         AUA              G               A  C     UUGAACA      AUAA   CUACUAUCUCAAAACUAUUUG ACA   AAAAAUUAU   AUUUGGAGACUCCU GUCUAUGCAUUAAGU AU AAAAA       GUCUAA    A   ||||||||||||||||||||| |||   |||||||||   |||||||||||||| ||||||||||||||| || |||||       ||||||    A   GAUGAUGGAGUUUUGAUGAAC UGU   UUUUUAGUA   UAAACUUCUGGGGA UAGAUACGUAGUUCA UA UUUUU       UAGAUU    U UA                     A   -AG         --C              G               C  A     ---UAUA      GAAG
Stem-loop sequence	CUACUAUCUCAAAACUAUUUGCACACAAAAAAAUUAUAUAAUUUGGAGACUCCUGGUCUAUGCAUUAAGUAAUCAAAAAUUGAACAGUCUAAAUAAAAUGAAGUUAGAUAUAUUUUUUAAUCACUUGAUGCAUAGAUGAGGGGUCUUCAAAUCAUGAUUUUUGAUGUACAAGUAGUUUUGAGGUAGUAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019847239.1	ncRNA:24   UAGAUGAUGGAGUUUUGAUGAACA   1   |||||||=|||||||||||||||| targets:3510   AUCUACUGCCUCAAAACUACUUGU   3533 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019847213.1	ncRNA:24   UAGAUGAUGGAGUUUUGAUGAACA   1   |||||||=|||||||||||||||| targets:3983   AUCUACUGCCUCAAAACUACUUGU   4006 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847185.1	ncRNA:24   UAGAUGAUGGAGUUUUGAUGAACA   1   |||||||=|||||||||||||||| targets:3986   AUCUACUGCCUCAAAACUACUUGU   4009 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01025286.1	ncRNA:24   UAGAUGAUGGAGUUUUGAUGAACA   1   |||-||||=|*||||||||||||* targets:79   AUC-ACUAUCACAAAACUACUUGA   101 Target Full Sequence	3.0	TSA: Elaeis guineensis Unigene7115_All transcribed RNA sequence	NA	coding protein	psRNATarget