ncRNA ID | novel_egu_miR610 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr15:18399631-18399709 [+] |
Reference genome | EG5 |
Source | SRR3042545;SRR3042547 |
Length | 21 |
Mature sequence(if miRNA) | 59 - UUUGCUGGUCAUCUGUCGAUG - 79 |
Stem-loop(if miRNA) |
--A                      A   C   -     C    UGAUGGAUGACCAGCAAACAAU CGU CAU GGAUA G    |||||||||||||||||||||| ||| ||| |||||    GCUGUCUACUGGUCGUUUGUUA GUA GUA CCUAU A GUA                      C   C   U     A |
Stem-loop sequence | AUGAUGGAUGACCAGCAAACAAUACGUCCAUGGAUACGAAUAUCCUAUGCAUGCAUUGUUUGCUGGUCAUCUGUCGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JO088549.1 |
|
2.5 | TSA: Elaeis guineensis isotig01298.Elguifruit mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JO088551.1 |
|
2.5 | TSA: Elaeis guineensis isotig01300.Elguifruit mRNA sequence | NA | coding protein | psRNATarget |