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BaseInfo

ncRNA ID novel_egu_miR610
Species Elaeis guineensis
Class miRNA
Genome position Chr15:18399631-18399709 [+]
Reference genome EG5
Source SRR3042545;SRR3042547
Length 21
Mature sequence(if miRNA) 59 - UUUGCUGGUCAUCUGUCGAUG - 79
Stem-loop(if miRNA) --A                      A   C   -     C
   UGAUGGAUGACCAGCAAACAAU CGU CAU GGAUA G
   |||||||||||||||||||||| ||| ||| |||||
   GCUGUCUACUGGUCGUUUGUUA GUA GUA CCUAU A
GUA                      C   C   U     A
Stem-loop sequence AUGAUGGAUGACCAGCAAACAAUACGUCCAUGGAUACGAAUAUCCUAUGCAUGCAUUGUUUGCUGGUCAUCUGUCGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JO088549.1
ncRNA:21   GUAGCUGUCUACUGGUCGUUU   1
  ==|=|||||||*|||||||||
targets:123   UGUUGACAGAUCACCAGCAAA   143

2.5 TSA: Elaeis guineensis isotig01298.Elguifruit mRNA sequence NA coding protein psRNATarget
JO088551.1
ncRNA:21   GUAGCUGUCUACUGGUCGUUU   1
  ==|=|||||||*|||||||||
targets:123   UGUUGACAGAUCACCAGCAAA   143

2.5 TSA: Elaeis guineensis isotig01300.Elguifruit mRNA sequence NA coding protein psRNATarget