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BaseInfo

ncRNA ID novel_egu_miR602
Species Elaeis guineensis
Class miRNA
Genome position Chr1:3322755-3322837 [+]
Reference genome EG5
Source SRR3042545
Length 21
Mature sequence(if miRNA) 1 - UACCUCAAAGAACGUUUCGAC - 21
Stem-loop(if miRNA) --            C             G      CUC    A
  UACCUCAAAGAA GUUUCGACCGCAA UGUGUG   GAAG C
  |||||||||||| ||||||||||||| ||||||   ||||
  AUGGAGUUUUUU CAAAGCUGGCGUU AUACAC   CUUC A
UA            A             G      ---    U
Stem-loop sequence UACCUCAAAGAACGUUUCGACCGCAAGUGUGUGCUCGAAGACAUCUUCCACAUAGUUGCGGUCGAAACAUUUUUUGAGGUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010914922.2
ncRNA:21   CAGCUUUGCAAGAAACUCCAU   1
  ||||||*=||||||||||||*
targets:1267   GUCGAAUUGUUCUUUGAGGUU   1287

3.0 PREDICTED: Elaeis guineensis heat shock protein 81-1-like (LOC105038975), mRNA NA coding protein psRNATarget