| ncRNA ID | novel_egu_miR601 |
| Species | Elaeis guineensis |
| Class | miRNA |
| Genome position | Chr7:24592725-24592927 [-] |
| Reference genome | EG5 |
| Source | SRR3042542 |
| Length | 24 |
| Mature sequence(if miRNA) | 180 - AAGCAAGGUCUGUGGAGGUGGCAA - 203 |
| Stem-loop(if miRNA) |
-----A G U G ---- UC UG GGUG G UG AA GA G CUAAUU -U U UUGGG GG AUU G AGCAAG UCUG GGAG UGG CAAU AU GA G AC CC GGGU GU C UAAGGA AG GGUGGAGGGG C UCAU UGGA A |||||| |||| |||| ||| |||| || || | || || |||| || | |||||| || |||||||||| | |||| |||| UUGUUU AGAU CCUU GUU GUUA UA UU U UG GG UCCG CA G AUUCUU UC UCACUUCCCC G AGUA AUCU U AUUUUG - - G UGGA GA GU --AG G GU GG -G - -----U UU U --UAA AG --G C |
| Stem-loop sequence | AAGCAAGGUCUGUGGAGGUGGCAAUUCAUUGGAGGUGGGACUGCCAAGGGUGAGUGCCUAAUUUAAGGAUAGUGGUGGAGGGGUUGGGCGGUCAUAUUUGGAGAUCUCUAGAUGAGAGAAUCCCCUUCACUUCUUUUUCUUAUGACGGCCUGGGGUGGUGUGAUUUGAUAGAUUGAGGUUUGGUUCCUAGAUUUGUUGUUUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| JO094205.1 |
|
2.0 | TSA: Elaeis guineensis isotig06948.Elguifruit mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| GBSV01025025.1 |
|
2.0 | TSA: Elaeis guineensis Unigene6854_All transcribed RNA sequence | NA | coding protein | psRNATarget |