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BaseInfo

ncRNA ID novel_egu_miR599
Species Elaeis guineensis
Class miRNA
Genome position Chr14:14712186-14712271 [+]
Reference genome EG5
Source SRR3042545;SRR3042548
Length 24
Mature sequence(if miRNA) 1 - UUCGAAUGAUAUGCGGAGGGUUCG - 24
Stem-loop(if miRNA) --U                ---G     GAGAGAACUAAGAAAA
   UCGAAUGAUAUGCGGA    GGUUC                A
   ||||||||||||||||    |||||                A
   GGUUUACUAUGCGUUU    UAGCU                U
AUU                UUCU     UUUUUUAAAGCUAUCA
Stem-loop sequence UUCGAAUGAUAUGCGGAGGGUUCGAGAGAACUAAGAAAAAAUACUAUCGAAAUUUUUUUCGAUUCUUUUUGCGUAUCAUUUGGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010913907.2
ncRNA:24   GCUU---GGGAGGCGUAUAGUAAGCUU   1
  =|==---|||||*|||||||||||||=
targets:1837   UGGGUGCCCCUCAGCAUAUCAUUCGAG   1863

2.0 PREDICTED: Elaeis guineensis DDT domain-containing protein PTM (LOC105038189), transcript variant X1, mRNA NA coding protein psRNATarget