ncRNA ID | novel_egu_miR594 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:25637356-25637542 [+] |
Reference genome | EG5 |
Source | SRR3042545 |
Length | 24 |
Mature sequence(if miRNA) | 164 - AAGGAUUUAUAGUGGUUCGGUGCU - 187 |
Stem-loop(if miRNA) |
--A        U  UA            -AUUA    UCACAAGGAAUGUGCUCAACUUGAUGAGUGAGGUGAGUUAAUUAACAAUGACAAAAG    AUUGGAUC CU  AAAUUUUUAGUA     GUGC                                                         A    |||||||| ||  ||||||||||||     ||||    UGGCUUGG GA  UUUAGGAAUUAU     AUAC                                                         U UCG        U  UA            AAACG    GAACGUAUAAAAAAAAAAAUAACACGAGAUAUGAACAAGUAAACAAUUAAUACAAAC |
Stem-loop sequence | AAUUGGAUCUCUUAAAAUUUUUAGUAAUUAGUGCUCACAAGGAAUGUGCUCAACUUGAUGAGUGAGGUGAGUUAAUUAACAAUGACAAAAGAUCAAACAUAAUUAACAAAUGAACAAGUAUAGAGCACAAUAAAAAAAAAAAUAUGCAAGCAUAGCAAAUAUUAAGGAUUUAUAGUGGUUCGGUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01018245.1 |
|
0.0 | TSA: Elaeis guineensis Unigene73_All transcribed RNA sequence | NA | coding protein | psRNATarget |