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BaseInfo

ncRNA ID novel_egu_miR583
Species Elaeis guineensis
Class miRNA
Genome position Chr6:23250081-23250163 [-]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 60 - AGCAAGUAGUGAGUGUCGUAGGUC - 83
Stem-loop(if miRNA) --A  -    -A   A           - ---AAAAG       A
   GC AAGU  GUG GUGUCGUAGGU C        AGACUCA A
   || ||||  ||| ||||||||||| |        |||||||
   CG UUCG  UAC CACGGUGUUCA G        UUUGAGU G
UAC  A    AA   -           U AAUACUAA       A
Stem-loop sequence AGCAAGUAGUGAGUGUCGUAGGUCAAAAGAGACUCAAAGAUGAGUUUAAUCAUAAGUACUUGUGGCACCAUAAGCUUAGCCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01048137.1
ncRNA:24   CUGGAUGCUGUGAGUGAUGAACGA   1
  |*||||=|||||||||||=|||||
targets:238   GCCCUAUGACACUCACUAUUUGCU   261

2.5 TSA: Elaeis guineensis Unigene29978_All transcribed RNA sequence NA coding protein psRNATarget