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BaseInfo

ncRNA ID novel_egu_miR581
Species Elaeis guineensis
Class miRNA
Genome position Chr7:42955467-42955521 [-]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 32 - ACUUUUUAAAAGCGUCGGCAGGUC - 55
Stem-loop(if miRNA) --A       A         C     U
   CUUUUUA AAGCGUCGG AGGUC G
   ||||||| ||||||||| ||||| U
   GAAAAAU UUCGCAGCC UUCAG G
UAC       C         A     U
Stem-loop sequence ACUUUUUAAAAGCGUCGGCAGGUCUGUGUGACUUACCGACGCUUCUAAAAAGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010945667.1
ncRNA:24   CUGGACGGCUGCGAAAAUUUUUCA   1
  |||||||||||||||||||||=|*
targets:367   GACCUGCCGACGCUUUUAAAAGGC   390

2.5 PREDICTED: Elaeis guineensis pathogenesis-related protein PRB1-3-like (LOC105061570), mRNA NA coding protein psRNATarget