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BaseInfo

ncRNA ID novel_egu_miR578
Species Elaeis guineensis
Class miRNA
Genome position Chr5:16903622-16903834 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 190 - UUUGAGAUAGUAGAUCACAUUCAA - 213
Stem-loop(if miRNA) --AAACA                     A        AAAA                    A      AUCAAUA                 U  -------GA    CUA
       UGAUCUACUAUCUCAAAAUUG UUGUACAC    AAAAAUCAUAUGAUUUGGAG CCCCUA       CAUCAAGUAGUCAAAAA UG         CAGU   A
       ||||||||||||||||||||| ||||||||    |||||||||||||||||||| ||||||       ||||||||||||||||| ||         ||||   A
       ACUAGAUGAUAGAGUUUUGAC AACGUGUG    UUUUUAGUAUACUAAACUUC GGGGAU       GUAGUUCAUUAGUUUUU AU         GUCA   U
AACUUAC                     A        ---A                    C      CGAAUAC                 U  AUAAAUUAA    AAA
Stem-loop sequence AAACAUGAUCUACUAUCUCAAAAUUGAUUGUACACAAAAAAAAAUCAUAUGAUUUGGAGACCCCUAAUCAAUACAUCAAGUAGUCAAAAAUUGGACAGUCUAAAUAAAACUGAAUUAAAUAUAUUUUUUGAUUACUUGAUGCAUAAGCUAGGGGCCUUCAAAUCAUAUGAUUUUUAGUGUGCAAACAGUUUUGAGAUAGUAGAUCACAUUCAA