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BaseInfo

ncRNA ID novel_egu_miR577
Species Elaeis guineensis
Class miRNA
Genome position Chr11:7526689-7526740 [+]
Reference genome EG5
Source SRR3042544
Length 21
Mature sequence(if miRNA) 32 - UCUUGAUAGCGGAUGCUCGAG - 52
Stem-loop(if miRNA) ---U         GAGA       GGAG
    GGCAUCCGU    GUUAAGA    A
    |||||||||    |||||||
    UCGUAGGCG    UAGUUCU    U
GAGC         ---A       AUGG
Stem-loop sequence UGGCAUCCGUGAGAGUUAAGAGGAGAUGGUAUCUUGAUAGCGGAUGCUCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01050859.1
ncRNA:21   GAGCUCGUAGGCGAUAGUUCU   1
  ||||||||||||||=||||||
targets:146   CUCGAGCAUCCGCUGUCAAGA   166

1.5 TSA: Elaeis guineensis Unigene32701_All transcribed RNA sequence NA coding protein psRNATarget
GBSV01031600.1
ncRNA:21   GAGCUCGUAGGCGAUAGUUCU   1
  *|*||||||*|||||||||||
targets:1238   AUAGAGCAUGCGCUAUCAAGA   1258

2.5 TSA: Elaeis guineensis Unigene13433_All transcribed RNA sequence NA coding protein psRNATarget