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BaseInfo

ncRNA ID	novel_egu_miR573
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr5:50157868-50157948 [+]
Reference genome	EG5
Source	SRR3042544
Length	22
Mature sequence(if miRNA)	1 - UCCAAAGGGAUCGCAUUGAUCC - 22
Stem-loop(if miRNA)	--                U      UUC   A   -  AUU U   UCCAAAGGGAUCGCAU GAUCCG   UUC CAU GC   C U   |||||||||||||||| ||||||   ||| ||| ||   |   AGGUUUUCCUAGCGUA CUAGGC   AAG GUA CG   G U CU                -      -CC   -   A  -GU U
Stem-loop sequence	UCCAAAGGGAUCGCAUUGAUCCGUUCUUCACAUGCAUUCUUUUGUGGCAAUGGAACCCGGAUCAUGCGAUCCUUUUGGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01008401.1	ncRNA:22   CCUAGUUACGCUAGGGAAACCU   1   |*|*|||||||||||||||||| targets:1754   GAAACAAUGCGAUCCCUUUGGA   1775 Target Full Sequence	1.0	TSA: Elaeis guineensis CL2911.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010931335.2	ncRNA:22   CCUAGUUACGCUAGGGAAACCU   1   |*|*|||||||||||||||||| targets:2061   GAAACAAUGCGAUCCCUUUGGA   2082 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis transport inhibitor response 1-like protein Os04g0395600 (LOC105051060), mRNA	NA	coding protein	psRNATarget
XM_010910773.2	ncRNA:22   CCUAGUUACGCUAGGGAAACCU   1   |*|*|||||||||||||||||| targets:2358   GAAACAAUGCGAUCCCUUUGGA   2379 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis transport inhibitor response 1-like protein Os04g0395600 (LOC105035262), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010910772.2	ncRNA:22   CCUAGUUACGCUAGGGAAACCU   1   |*|*|||||||||||||||||| targets:2358   GAAACAAUGCGAUCCCUUUGGA   2379 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis transport inhibitor response 1-like protein Os04g0395600 (LOC105035262), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010910771.2	ncRNA:22   CCUAGUUACGCUAGGGAAACCU   1   |*|*|||||||||||||||||| targets:2358   GAAACAAUGCGAUCCCUUUGGA   2379 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis transport inhibitor response 1-like protein Os04g0395600 (LOC105035262), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010910770.2	ncRNA:22   CCUAGUUACGCUAGGGAAACCU   1   |*|*|||||||||||||||||| targets:2358   GAAACAAUGCGAUCCCUUUGGA   2379 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis transport inhibitor response 1-like protein Os04g0395600 (LOC105035262), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010906460.2	ncRNA:22   CCUA-GUUACGCUAGGGAAACCU   1   |||*-|||||||||||||||||| targets:1640   GGAGACAAUGCGAUCCCUUUGGA   1662 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis transport inhibitor response 1-like protein Os05g0150500 (LOC105032107), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01017115.1	ncRNA:22   CCUA-GUUACGCUAGGGAAACCU   1   |||*-|||||||||||||||||| targets:1635   GGAGACAAUGCGAUCCCUUUGGA   1657 Target Full Sequence	3.0	TSA: Elaeis guineensis CL6467.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010906461.2	ncRNA:22   CCUA-GUUACGCUAGGGAAACCU   1   |||*-|||||||||||||||||| targets:1641   GGAGACAAUGCGAUCCCUUUGGA   1663 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis transport inhibitor response 1-like protein Os05g0150500 (LOC105032107), transcript variant X2, mRNA	NA	coding protein	psRNATarget