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BaseInfo

ncRNA ID novel_egu_miR572
Species Elaeis guineensis
Class miRNA
Genome position Chr7:43356669-43356746 [-]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 1 - AGUGUAUGUUGGCUAUAGUAGGUU - 24
Stem-loop(if miRNA) --A        U UG  U       - UCU      U UA
   UUGCUGUG U  AU GUACAUU C   UGAUCU C  G
   |||||||| |  || ||||||| |   |||||| |  U
   GAUGAUAU G  UG UAUGUGA G   ACUAGG G  C
UUG        C GU  -       U -UU      U UA
Stem-loop sequence AUUGCUGUGUUUGAUUGUACAUUCUCUUGAUCUUCUAGUCAUGUGGAUCAUUGUAGUGUAUGUUGGCUAUAGUAGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01035333.1
ncRNA:24   UUGGAUGAUAUCGGUUGUAUGUGA   1
  ||=*|=|||*|||||||||||||*
targets:57   AAUAUGCUACAGCCAACAUACACC   80

3.0 TSA: Elaeis guineensis Unigene17168_All transcribed RNA sequence NA coding protein psRNATarget