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BaseInfo

ncRNA ID	novel_egu_miR566
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr4:46738679-46738743 [+]
Reference genome	EG5
Source	SRR3042544
Length	24
Mature sequence(if miRNA)	42 - AUAAGGCAUCAAAAAAUCAUAUAU - 65
Stem-loop(if miRNA)	--      C   C               C  C   AUAUGA UUU UGAUGUCUUAUAUGA CA C   |||||| ||| ||||||||||||||| || U   UAUACU AAA ACUACGGAAUAUACU GU A UA      A   A               A  U
Stem-loop sequence	AUAUGACUUUCUGAUGUCUUAUAUGACCACCUAUUGAUCAUAUAAGGCAUCAAAAAAUCAUAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019855250.1	ncRNA:24   UAUAUACUAAAAAACUACGGAAUA   1   *|=|*||||||||||*|||||||* targets:3270   UUGUUUGAUUUUUUGUUGCCUUAA   3293 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis zinc finger BED domain-containing protein RICESLEEPER 2 (LOC105057998), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_019855249.1	ncRNA:24   UAUAUACUAAAAAACUACGGAAUA   1   *|=|*||||||||||*|||||||* targets:3270   UUGUUUGAUUUUUUGUUGCCUUAA   3293 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis zinc finger BED domain-containing protein RICESLEEPER 2 (LOC105057998), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_019855248.1	ncRNA:24   UAUAUACUAAAAAACUACGGAAUA   1   *|=|*||||||||||*|||||||* targets:3270   UUGUUUGAUUUUUUGUUGCCUUAA   3293 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis zinc finger BED domain-containing protein RICESLEEPER 2 (LOC105057998), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_019855245.1	ncRNA:24   UAUAUACUAAAAAACUACGGAAUA   1   *|=|*||||||||||*|||||||* targets:3154   UUGUUUGAUUUUUUGUUGCCUUAA   3177 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis zinc finger BED domain-containing protein RICESLEEPER 2 (LOC105057998), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019855247.1	ncRNA:24   UAUAUACUAAAAAACUACGGAAUA   1   *|=|*||||||||||*|||||||* targets:3270   UUGUUUGAUUUUUUGUUGCCUUAA   3293 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis zinc finger BED domain-containing protein RICESLEEPER 2 (LOC105057998), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019855244.1	ncRNA:24   UAUAUACUAAAAAACUACGGAAUA   1   *|=|*||||||||||*|||||||* targets:3270   UUGUUUGAUUUUUUGUUGCCUUAA   3293 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis zinc finger BED domain-containing protein RICESLEEPER 2 (LOC105057998), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019855246.1	ncRNA:24   UAUAUACUAAAAAACUACGGAAUA   1   *|=|*||||||||||*|||||||* targets:3281   UUGUUUGAUUUUUUGUUGCCUUAA   3304 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis zinc finger BED domain-containing protein RICESLEEPER 2 (LOC105057998), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010908666.2	ncRNA:24   UAUAUACUAAAAAACUACGGAAUA   1   ***|||||*|||||||||*||||| targets:1207   UGUUAUGACUUUUUGAUGACUUAU   1230 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105033756 (LOC105033756), mRNA	NA	coding protein	psRNATarget