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BaseInfo

ncRNA ID novel_egu_miR564
Species Elaeis guineensis
Class miRNA
Genome position Chr3:2604534-2604619 [+]
Reference genome EG5
Source SRR3042544
Length 24
Mature sequence(if miRNA) 1 - UGACAUUCUGUGGCAUAUUAUGAU - 24
Stem-loop(if miRNA) --   C      U G             C      UAAAUUAU
  UGA AUUCUG G CAUAUUAUGAUAU CUGUAU        G
  ||| |||||| | ||||||||||||| ||||||
  ACU UAAGAC U GUAUAAUACUAUA GACGUA        A
AU   A      C G             A      CGUCUUUC
Stem-loop sequence UGACAUUCUGUGGCAUAUUAUGAUAUCCUGUAUUAAAUUAUGACUUUCUGCAUGCAGAAUAUCAUAAUAUGGUCCAGAAUAUCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010936397.2
ncRNA:24   UAGUAUUAUACGGUGUCUUACAGU   1
  ||=*|=|||**|||||||||||||
targets:1711   AUUUUGAUAGCCCACAGAAUGUCA   1734

3.0 PREDICTED: Elaeis guineensis ABC transporter B family member 10-like (LOC105054803), mRNA NA coding protein psRNATarget
XM_010936395.2
ncRNA:24   UAGUAUUAUACGGUGUCUUACAGU   1
  ||=*|=|||**|||||||||||||
targets:1708   AUUUUGAUAGCCCACAGAAUGUCA   1731

3.0 PREDICTED: Elaeis guineensis ABC transporter B family member 19-like (LOC105054801), mRNA NA coding protein psRNATarget