ncRNA ID | novel_egu_miR564 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr3:2604534-2604619 [+] |
Reference genome | EG5 |
Source | SRR3042544 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGACAUUCUGUGGCAUAUUAUGAU - 24 |
Stem-loop(if miRNA) |
--   C      U G             C      UAAAUUAU   UGA AUUCUG G CAUAUUAUGAUAU CUGUAU        G   ||| |||||| | ||||||||||||| ||||||   ACU UAAGAC U GUAUAAUACUAUA GACGUA        A AU   A      C G             A      CGUCUUUC |
Stem-loop sequence | UGACAUUCUGUGGCAUAUUAUGAUAUCCUGUAUUAAAUUAUGACUUUCUGCAUGCAGAAUAUCAUAAUAUGGUCCAGAAUAUCAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010936397.2 |
|
3.0 | PREDICTED: Elaeis guineensis ABC transporter B family member 10-like (LOC105054803), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010936395.2 |
|
3.0 | PREDICTED: Elaeis guineensis ABC transporter B family member 19-like (LOC105054801), mRNA | NA | coding protein | psRNATarget |