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BaseInfo

ncRNA ID	novel_egu_miR563
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr3:23284077-23284211 [-]
Reference genome	EG5
Source	SRR3042544
Length	24
Mature sequence(if miRNA)	1 - UGGGAUUUUGUGCGAGUUGUGGCU - 24
Stem-loop(if miRNA)	-AUGGGAU    UG    -  G    -  --GU   UU GU  UG      - ---    --GA    AU G         UUUG  CAAA UU UGCA GU    GAG  G  CC  AUUGGG C   AAAG    GAUC  C G         ||||  |||| || |||| ||    |||  |  ||  |||||| |   ||||    ||||  |         GAGC  GUUU AG GUGU CG    CUU  U  GG  UAACCU G   UUUC    UUAG  G A UCGGUGUU    GU    U  G    A  AGUU   UU UG  GU      U AAU    AGGC    AG A
Stem-loop sequence	AUGGGAUUUUGUGCAAAUUGUGCAGUGUGAGUUGGUCCUGAUUGGGCAAAGGAGAUCAUCGGAAGGAGAUUCGGACUUUUAAGUUCCAAUUGGGGUUUUUUCUUGAGCAUGUGGGAUUUUGUGCGAGUUGUGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01018175.1	ncRNA:24   UCGGUGUUGAGCGUGUUUUAGGGU   1   **|||||||||||||||||*|||* targets:2905   CACCACAACUCGCACAAAAGCCCC   2928 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene3_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010923640.1	ncRNA:24   UCGGUGUUGAGCGUGUUUUAGGGU   1   *|==-||=|||*|||||||||||| targets:1318   UGUU-CAGCUCACACAAAAUCCCA   1340 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105045381 (LOC105045381), mRNA	NA	coding protein	psRNATarget
GBSV01048117.1	ncRNA:24   UCGGUGUUGAGCGUGUUUUAGGGU   1   *|||||||*|=||||||||||||= targets:111   CGCCACAAAUUGCACAAAAUCCCG   134 Target Full Sequence	3.0	TSA: Elaeis guineensis Unigene29958_All transcribed RNA sequence	NA	coding protein	psRNATarget