| ncRNA ID | novel_egu_miR562 |
| Species | Elaeis guineensis |
| Class | miRNA |
| Genome position | Chr3:59745310-59745489 [-] |
| Reference genome | EG5 |
| Source | SRR3042544 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUUGCUGGCUUUACUAUUAUUGGA - 24 |
| Stem-loop(if miRNA) |
-UGAUG UG A CA C --C --------- AAACA A A AAUAGUGAAGC GCAGUGGGUUU C GCUU ACUAUUU AAUUUUUUUUAAAAAA AAUUGAG AUGAA CCG C ||||||||||| ||||||||||| | |||| ||||||| |||||||||||||||| ||||||| ||||| ||| UUAUCAUUUCG CGUUACCCAAA G CGAA UGAUAAA UUGAAAAAAAUUUUUU UUAAUUC UAUUU GGC A AGGUUA GU C AC A AAA AUAAUUUUA --GAC A A |
| Stem-loop sequence | UGAUGAAUAGUGAAGCUGGCAGUGGGUUUACCAGCUUCACUAUUUCAAUUUUUUUUAAAAAAAAUUGAGAAACAAUGAAACCGACAACGGAUUUAUCAGCUUAAUUAUUUUAAUAUUUUUUAAAAAAAGUUAAAAAAUAGUAAAGCCAGCAAACCCAUUGCUGGCUUUACUAUUAUUGGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GBSV01027479.1 |
|
3.0 | TSA: Elaeis guineensis Unigene9311_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_010929110.2 |
|
3.0 | PREDICTED: Elaeis guineensis uncharacterized LOC105049460 (LOC105049460), mRNA | NA | coding protein | psRNATarget |