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BaseInfo

ncRNA ID	novel_egu_miR556
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr2:9014352-9014575 [-]
Reference genome	EG5
Source	SRR3042544
Length	24
Mature sequence(if miRNA)	201 - UUUUGAAUGACGAAAAUACUCCUA - 224
Stem-loop(if miRNA)	--                  C    A       AA               A    --         GACAUCAUGUAGUAUAUUAUGACAUCAUGUGGCAUAUUAUGGCAUCA   UUUUGAAUGACGAAAAUA UCCU CUCUUUG  AAAAAUUAUGACAUU UCUA  GUAUAUUAU                                               A   |||||||||||||||||| |||| |||||||  ||||||||||||||| ||||  |||||||||   AAAACUUGCUGCUUUUAU AGGA GAGAAAU  UUUUUAAUACUGUAG AUAC  GUAUAAUAC                                               A UU                  A    C       CA               A    AG         UGUAGAACGUACGUCCUUCAGUAUUAAACUGCACGUCUUACAGUAUU
Stem-loop sequence	UUUUGAAUGACGAAAAUACUCCUACUCUUUGAAAAAAAUUAUGACAUUAUCUAGUAUAUUAUGACAUCAUGUAGUAUAUUAUGACAUCAUGUGGCAUAUUAUGGCAUCAAAUUAUGACAUUCUGCACGUCAAAUUAUGACUUCCUGCAUGCAAGAUGUCAUAAUAUGGACAUAAGAUGUCAUAAUUUUUACUAAAGAGCAGGAAUAUUUUCGUCGUUCAAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019853582.1	ncRNA:24   AUCCUCAUAAAAGCAGUAAGUUUU   1   *|||=|*||||||||*|||||||| targets:9   GAGGGGCAUUUUCGUAAUUCAAAA   32 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis rop guanine nucleotide exchange factor 14 (LOC105053520), transcript variant X2, mRNA	NA	coding protein	psRNATarget