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BaseInfo

ncRNA ID	novel_egu_miR555
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr2:10662324-10662395 [-]
Reference genome	EG5
Source	SRR3042544;SRR3042547
Length	21
Mature sequence(if miRNA)	52 - AGGUGCAAGUGAACCGGGGCA - 72
Stem-loop(if miRNA)	--                 G        --   A CA   AGGUGCAAGUGAACCGG GCAAAUCC  CGG G  U   ||||||||||||||||| ||||||||  ||| |   UCCACGUUCACUUGGCC CGUUUAGG  GCC C  A GG                 G        CU   A CU
Stem-loop sequence	AGGUGCAAGUGAACCGGGGCAAAUCCCGGAGCAUAUCCACCGUCGGAUUUGCGCCGGUUCACUUGCACCUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010918343.2	ncRNA:21   ACGGGGCCAAGUGAACGUGGA   1   ||||=|||||||||||||||| targets:128   UGCCUCGGUUCACUUGCACCU   148 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis probable carboxylesterase 2 (LOC105041381), mRNA	NA	coding protein	psRNATarget
GBSV01023548.1	ncRNA:21   ACGGGGCCAAGUGAACGUGGA   1   |||||=||||||||||||||| targets:150   UGCCCUGGUUCACUUGCACCU   170 Target Full Sequence	1.0	TSA: Elaeis guineensis Unigene5377_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010940818.2	ncRNA:21   ACGGGGCCAAGUGAACGUGGA   1   |||||=||||||||||||||| targets:590   UGCCCUGGUUCACUUGCACCU   610 Target Full Sequence	1.0	PREDICTED: Elaeis guineensis elongator complex protein 5 (LOC105058042), mRNA	NA	coding protein	psRNATarget
XM_010929220.2	ncRNA:21   ACGGGGCCAAGUGAACGUGGA   1   ||||||||||||||||*|||| targets:18   UGCCCCGGUUCACUUGGACCU   38 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis calmodulin-binding protein 60 E (LOC105049544), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010913616.2	ncRNA:21   ACGGGGCCAAGUGAACGUGGA   1   |||||||||||||*||||||| targets:22   UGCCCCGGUUCACCUGCACCU   42 Target Full Sequence	1.5	PREDICTED: Elaeis guineensis putative disease resistance protein RGA4 (LOC105037974), mRNA	NA	coding protein	psRNATarget
XM_010912487.2	ncRNA:21   ACGGGGCCAAGUGAACGUGGA   1   |||||=||||||||||||=|| targets:2856   UGCCCUGGUUCACUUGCAUCU   2876 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis factor of DNA methylation 1-like (LOC105036753), mRNA	NA	coding protein	psRNATarget
GBSV01048278.1	ncRNA:21   ACGGGGCCAAGUGAACGUGGA   1   **||==||||||||||||||* targets:31   AACCUUGGUUCACUUGCACCG   51 Target Full Sequence	3.0	TSA: Elaeis guineensis Unigene30119_All transcribed RNA sequence	NA	coding protein	psRNATarget
JO099888.1	ncRNA:21   ACGGGGCCAAGUGAACGUGGA   1   **||==||||||||||||||* targets:207   AACCUUGGUUCACUUGCACCG   227 Target Full Sequence	3.0	TSA: Elaeis guineensis isotig12661.Elguifruit mRNA sequence	NA	coding protein	psRNATarget